CDS

Accession Number TCMCG057C28672
gbkey CDS
Protein Id XP_018485383.1
Location complement(join(<39788609..39788982,39789065..39789262,39789354..39789527,39789603..39789680,39789777..39789956,39790050..39790078,39790304..39790377))
Gene LOC108856142
GeneID 108856142
Organism Raphanus sativus

Protein

Length 390aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018629881.1
Definition PREDICTED: E3 ubiquitin-protein ligase PRT1 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category O
Description Ubiquitin-protein ligase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004842        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006508        [VIEW IN EMBL-EBI]
GO:0006511        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006952        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009607        [VIEW IN EMBL-EBI]
GO:0009620        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010498        [VIEW IN EMBL-EBI]
GO:0016567        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019787        [VIEW IN EMBL-EBI]
GO:0019941        [VIEW IN EMBL-EBI]
GO:0030163        [VIEW IN EMBL-EBI]
GO:0032446        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0043161        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043207        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043632        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044257        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0050832        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051603        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0051707        [VIEW IN EMBL-EBI]
GO:0061630        [VIEW IN EMBL-EBI]
GO:0061659        [VIEW IN EMBL-EBI]
GO:0070647        [VIEW IN EMBL-EBI]
GO:0071596        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0098542        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901565        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAGGATGTTACAATGAAGAACGCTGAGCTACACGAAGAAATCTCCGACAAGTTTCTCTGCTGCGTCTGCCTGGAACTTCTTTACAAACCGATTGTGCTATCATGTGGACACCTATCGTGTTTCTGGTGCGTACACAAGTCAATGAACGAGCTGCGTGAGTCTCATTGTCCCATTTGCAGAGACCCTTATGTTCACTTTCCTGCTGTCTGCCAAAAGCTCCACTTCCTCCTCAAGAAGATTTACCCTCTTGCCCACCACAAGAGAGAAGAACAAGTTCTAAAGGAGGAACAAGAACTAGAATGTTTTTCACCTCAGATTGATGAACCAAAGCCCAAGGAAGCGTCTGTATCTAGTGGAGATGAGCAGAAGGTGGAAAAGTGCTCTAATAATGCAGGAAGTTTACTATCAAGTGAAGAACCTAGAGATGCAAAAGCTCTTGATGAGAATAATAAGCAAATTTCGAAAGATGATTTGCTCTGTTTAGCATGTAAGGAGCTGCTTGTGCGACCCGTTGTTCTCAACTGCGGACATGTGTATTGTGAAGGATGTGTAGTAGATATGTTTCAAGAGGGCGAAAAGATCAAATGTCAAGAGTGTCATATCTCTGACCCGAGAGGGTTTCCTAAAGTTTGTTTGGTTCTTGAGCAGCTTTTGGAGGAGAACTTTCCTCAAGAATACAATTCAAGGAGAAGTGGGATTCAGAAATCGATTCCCCAGTCGAGCAAAGGAAACAGTCAAAGCTCTCACAAAGAAGGCCCATCCGTATCAGGCGAGAACAACAATGACCTTCCCTGGTGGGCGAACCCTGCGTCTAATGTTCACATCGGAGCTGGTTGTGATTGTTGCGGAGTGTATCCAATCATAGGGGAGCGATACAGATGCAAAGACTGCAAGGAAGAGATTGGTTATGACCTATGCAAAGACTGTTACGAGACTCCTTCGAAAGTTCCAGGGAGATTCAACCAACAACACACCCCAGACCACAGGCTTGAGCTCGCTCAGGTTCCTCAGTTTCTGGTCAATATCGAGTCTATCGGCTTCCTTCTAGGTCCGATGGTTAGTGAAGGCGTGAGTGGAGAAGAAAATAGTGATGATGATGATGAT
Protein:  
MEDVTMKNAELHEEISDKFLCCVCLELLYKPIVLSCGHLSCFWCVHKSMNELRESHCPICRDPYVHFPAVCQKLHFLLKKIYPLAHHKREEQVLKEEQELECFSPQIDEPKPKEASVSSGDEQKVEKCSNNAGSLLSSEEPRDAKALDENNKQISKDDLLCLACKELLVRPVVLNCGHVYCEGCVVDMFQEGEKIKCQECHISDPRGFPKVCLVLEQLLEENFPQEYNSRRSGIQKSIPQSSKGNSQSSHKEGPSVSGENNNDLPWWANPASNVHIGAGCDCCGVYPIIGERYRCKDCKEEIGYDLCKDCYETPSKVPGRFNQQHTPDHRLELAQVPQFLVNIESIGFLLGPMVSEGVSGEENSDDDDDDDSEEEDVPPPDSNEVSSSAD